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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2908318_2908552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2908318 - 2908552

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAAGCA

5'SS Class:

strong_major

3'SS Sequence:

CCTCTCCACTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTATAAT

U12 Branch Point Sequence:

TCGGTTATAATT

Flanking Amino Acid:

LAYLKKNHEEEMSALGGQVA

Intron Amino Acid Position:

235

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.74

0.9

71.1

32.5

Major BPS

87.8

0.94

0.9

86.6

28.1

Major PPT

67.6

0.4

0.8

28.9

Minor 5ss

30.1

-2.3

3.3

39.5

45.9

Minor BPS

48.5

-0

1.7

63.19

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021729

2907127 - 2911177

4051

ENSAPLT00000009402

2905942 - 2911177

5236