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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2909108_2910715_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2909108 - 2910715

Intron Length:

1608

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTT

5'SS Class:

strong_major

3'SS Sequence:

TCATTGTTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

AGTTGTTTAAGC

Flanking Amino Acid:

HKTIEDLRDQILAATIDNSK

Intron Amino Acid Position:

155

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

85.2

32.2

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

0.61

0.9

69.4

41.5

Minor 5ss

37.2

-1.4

3.6

57.3

47.4

Minor BPS

0.04

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000008997

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021729

2907127 - 2911177

4051

ENSAPLT00000009402

2905942 - 2911177

5236