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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2943889_2944117_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2943889 - 2944117

Intron Length:

229

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTTCCGTTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

GCATTTTTATTT

Flanking Amino Acid:

EIELQSQISMIDSLQSNLDD

Intron Amino Acid Position:

433

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.94

0.8

26.1

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.9

0.81

0.8

80.4

31.6

Minor 5ss

35.2

-1.7

2.7

39.2

40.5

Minor BPS

52.5

0.16

1.5

64.37

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029963

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044743

2942006 - 2947616

5611