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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2959188_2959785_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2959188 - 2959785

Intron Length:

598

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGTGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

TTGTCCTCACTA

Flanking Amino Acid:

YGEIEDLQNQLVTAAVETNK

Intron Amino Acid Position:

240

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

70.4

42.5

Major BPS

72.4

0.56

73.5

32.5

Major PPT

84.4

0.77

0.7

77.4

31.4

Minor 5ss

37.1

-1.5

3.6

55.4

48.8

Minor BPS

58.3

0.26

1.8

71.31

41.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010116

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010535

2954702 - 2960502

5801