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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2969278_2969845_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2969278 - 2969845

Intron Length:

568

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TTGCACAAACCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTGCAC

U12 Branch Point Sequence:

TTTTTTTGCACA

Flanking Amino Acid:

SRMAADDFRVKYETELALRQ

Intron Amino Acid Position:

191

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.1

31.2

Major BPS

65.1

0.38

1.4

77.4

37.4

Major PPT

57.7

0.17

1.1

49.6

42.7

Minor 5ss

30.2

-2.3

3.1

36.2

34.2

Minor BPS

56.5

0.2

1.9

75.34

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037248

2966651 - 2971287

4637