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Intron Name: Anas_platyrhynchos_platyrhynchos_28_2969929_2970798_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2969929 - 2970798

Intron Length:

870

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCCCA

5'SS Class:

major

3'SS Sequence:

TGCTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTCAT

U12 Branch Point Sequence:

CATCTCTCATGC

Flanking Amino Acid:

YKEIEDLQNQIVCATIDNNK

Intron Amino Acid Position:

164

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

64.4

41.6

Major BPS

82.6

0.81

0.9

83.3

27.7

Major PPT

84.3

0.77

0.8

76.4

37.7

Minor 5ss

38.2

-1.3

49.2

46.5

Minor BPS

41.8

-0.6

1.9

48.62

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028586

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037248

2966651 - 2971287

4637