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Intron Name: Anas_platyrhynchos_platyrhynchos_28_302129_307405_F

Intron Information:

Intron Rank:

149606

Intron Class:

major

Intron Phase:

Intron Coordinates:

302129 - 307405

Intron Length:

5277

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGGAAG

5'SS Class:

major

3'SS Sequence:

ATATCTCTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTCAT

U12 Branch Point Sequence:

TTTCCATGCACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.9

0.61

65.6

41.7

Major BPS

79.8

0.74

0.9

81.3

29.9

Major PPT

80.3

0.68

0.9

74.1

35.7

Minor 5ss

24.8

-2.9

3.1

29.2

43.7

Minor BPS

48.7

-0.1

2.2

70.43

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030499

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024958

247208 - 307936

60729