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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3023555_3023792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3023555 - 3023792

Intron Length:

238

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGGAAA

5'SS Class:

major

3'SS Sequence:

TCTTAACTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAA

U12 Branch Point Sequence:

CTATTCTTAACT

Flanking Amino Acid:

IMGIGHRVKSINNPDMRVQI

Intron Amino Acid Position:

315

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.1

0.52

1.1

37.4

Major BPS

82.2

0.8

71.9

35.8

Major PPT

80.8

0.69

0.9

74.1

35.3

Minor 5ss

33.8

-1.8

3.2

45.1

43.8

Minor BPS

81.4

1.06

1.1

88.33

36.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016814

3021584 - 3030826

9243