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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3024685_3025417_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3024685 - 3025417

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTTGCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTACAA

U12 Branch Point Sequence:

TTTACAATAAAT

Flanking Amino Acid:

GVLGLLWFQKRLPKYACQFI

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

70.9

36.4

Major BPS

73.5

0.59

81.3

29.9

Major PPT

80.5

0.69

0.8

80.1

31.9

Minor 5ss

24.6

-2.9

28.8

43.6

Minor BPS

53.8

0.2

81.05

39.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016814

3021584 - 3030826

9243