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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3026248_3026782_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3026248 - 3026782

Intron Length:

535

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCATA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTGTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTATCAC

U12 Branch Point Sequence:

TATTCCTTACTG

Flanking Amino Acid:

GTCATMFSSEVQFGHAGACA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.2

0.8

87.1

Major BPS

0.4

1.1

69.4

35.8

Major PPT

84.8

0.78

0.8

80.6

31.4

Minor 5ss

-0.8

2.9

57.2

47.1

Minor BPS

69.2

0.46

1.7

72.44

40.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016814

3021584 - 3030826

9243