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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3027342_3027510_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3027342 - 3027510

Intron Length:

169

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAGTC

5'SS Class:

strong_major

3'SS Sequence:

GTGTTCTACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAA

U12 Branch Point Sequence:

ACAAACTCAACT

Flanking Amino Acid:

VYEGVAIGGDRYPGSTFMDH

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

73.3

36.4

Major BPS

69.1

0.48

0.9

69.6

26.6

Major PPT

70.3

0.46

62.4

43.5

Minor 5ss

33.6

-1.9

3.7

49.4

47.1

Minor BPS

49.7

0.06

1.8

65.91

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016814

3021584 - 3030826

9243