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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3028068_3028552_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3028068 - 3028552

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGAG

5'SS Class:

strong_major

3'SS Sequence:

TATCTTGATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

GTTATCTTGATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.96

0.8

77.5

32.9

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

0.56

69.9

40.2

Minor 5ss

26.6

-2.7

30.5

43.3

Minor BPS

61.1

0.2

1.4

63.41

38.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016814

3021584 - 3030826

9243