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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3028722_3030623_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3028722 - 3030623

Intron Length:

1902

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

TTCTCCTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

CCTTTCTCATCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.68

1.3

76.2

39.9

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.88

0.6

84.2

23.6

Minor 5ss

37.5

-1.4

2.7

45.1

35.9

Minor BPS

53.1

0.18

1.9

71.23

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016067

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016814

3021584 - 3030826

9243