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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3071371_3074616_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3071371 - 3074616

Intron Length:

3246

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGGA

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTATGAC

U12 Branch Point Sequence:

TTGAGTATGACA

Flanking Amino Acid:

FGGPGGFSFEGCE*

Intron Amino Acid Position:

708

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

72.4

39.5

Major BPS

0.17

1.3

51.4

43.9

Major PPT

88.3

0.86

0.7

81.1

Minor 5ss

30.7

-2.2

3.4

40.4

45.8

Minor BPS

45.2

-0.3

59.62

40.5

Associated Gene:

Gene:

DNAJC7

Ensembl Gene ID:

ENSAPLG00000002392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018062

3071244 - 3093381

22138