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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3074680_3075271_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3074680 - 3075271

Intron Length:

592

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTCCCTGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TTTTACTTCATC

Flanking Amino Acid:

DLEEDGLNMGDFDANNIFKA

Intron Amino Acid Position:

687

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.1

0.99

0.8

92.6

23.1

Major BPS

78.6

0.71

79.6

32.9

Major PPT

82.3

0.73

0.7

78.1

23.9

Minor 5ss

41.8

-0.9

2.9

57.3

41.2

Minor BPS

64.1

0.43

1.9

79.2

36.3

Associated Gene:

Gene:

DNAJC7

Ensembl Gene ID:

ENSAPLG00000002392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018062

3071244 - 3093381

22138

ENSAPLT00000002485

3073475 - 3093381

19907