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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3076260_3077466_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3076260 - 3077466

Intron Length:

1207

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGTAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTCTTTCCACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTCAA

U12 Branch Point Sequence:

TTTCTTTCCACA

Flanking Amino Acid:

YIKAYLRRAQCYMDTEQYED

Intron Amino Acid Position:

562

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

79.8

35.3

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

87.8

0.85

0.6

83.8

24.5

Minor 5ss

35.2

-1.7

2.7

39.5

40.9

Minor BPS

-0

1.9

68.33

38.3

Associated Gene:

Gene:

DNAJC7

Ensembl Gene ID:

ENSAPLG00000002392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018062

3071244 - 3093381

22138

ENSAPLT00000002485

3073475 - 3093381

19907