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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3077559_3078566_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3077559 - 3078566

Intron Length:

1008

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TCTGACTTTGTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

ATTCACTTAACT

Flanking Amino Acid:

YCNRGTVNSKLRKLEEAIDD

Intron Amino Acid Position:

532

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.9

1.03

0.7

89.8

22.3

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

75.6

0.58

0.9

69.6

36.4

Minor 5ss

35.1

-1.7

3.1

48.5

47.2

Minor BPS

0.9

1.4

89.6

33.6

Associated Gene:

Gene:

DNAJC7

Ensembl Gene ID:

ENSAPLG00000002392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018062

3071244 - 3093381

22138

ENSAPLT00000002485

3073475 - 3093381

19907