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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3080242_3081246_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3080242 - 3081246

Intron Length:

1005

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGATTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCACATCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAC

U12 Branch Point Sequence:

TTTTTCTCACAT

Flanking Amino Acid:

VDFEKRDFRKVVFCMDRALE

Intron Amino Acid Position:

386

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.8

0.99

0.8

81.6

33.2

Major BPS

0.87

0.8

85.6

Major PPT

76.8

0.6

0.9

32.4

Minor 5ss

41.6

-0.9

3.1

55.7

48.5

Minor BPS

56.6

0.29

1.9

81.14

40.4

Associated Gene:

Gene:

DNAJC7

Ensembl Gene ID:

ENSAPLG00000002392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018062

3071244 - 3093381

22138

ENSAPLT00000002485

3073475 - 3093381

19907