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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3081322_3081860_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3081322 - 3081860

Intron Length:

539

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGAGGT

5'SS Class:

strong_major

3'SS Sequence:

TGCTGTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CAGTGAC

U12 Branch Point Sequence:

CTGTCCTGCAAG

Flanking Amino Acid:

DHKNTQAQQELKNASTVLEY

Intron Amino Acid Position:

361

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.8

0.96

0.8

78.9

35.3

Major BPS

51.2

0.03

1.2

44.4

38.7

Major PPT

80.3

0.68

0.9

76.9

37.4

Minor 5ss

32.2

-2

3.5

47.6

47.9

Minor BPS

-0.4

2.1

53.26

47.1

Associated Gene:

Gene:

DNAJC7

Ensembl Gene ID:

ENSAPLG00000002392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018062

3071244 - 3093381

22138

ENSAPLT00000002485

3073475 - 3093381

19907