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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3082193_3082673_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3082193 - 3082673

Intron Length:

481

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

ACATTTTCTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTACAT

U12 Branch Point Sequence:

CTTACATTACAC

Flanking Amino Acid:

EAYNYYTKAIDTCPNNASYY

Intron Amino Acid Position:

281

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.3

0.86

0.8

73.9

29.7

Major BPS

70.4

0.51

1.1

78.7

33.6

Major PPT

78.5

0.64

0.9

40.7

Minor 5ss

25.3

-2.8

3.1

30.4

42.9

Minor BPS

47.4

-0.2

61.64

43.2

Associated Gene:

Gene:

DNAJC7

Ensembl Gene ID:

ENSAPLG00000002392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018062

3071244 - 3093381

22138

ENSAPLT00000002485

3073475 - 3093381

19907