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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3082763_3092530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3082763 - 3092530

Intron Length:

9768

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGCCG

5'SS Class:

major

3'SS Sequence:

TACTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

TTGTGTTGTACT

Flanking Amino Acid:

EPESEEEEARREAESFKEQG

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.9

0.63

1.1

58.1

46.4

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

84.1

0.77

0.8

81.3

30.3

Minor 5ss

-2.3

3.4

39.4

Minor BPS

47.6

-0.1

2.2

72.25

44.8

Associated Gene:

Gene:

DNAJC7

Ensembl Gene ID:

ENSAPLG00000002392

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018062

3071244 - 3093381

22138

ENSAPLT00000002485

3073475 - 3093381

19907