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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3117588_3119679_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3117588 - 3119679

Intron Length:

2092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGTGTACG

5'SS Class:

strong_major

3'SS Sequence:

TTAACTGGCTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTTAA

U12 Branch Point Sequence:

GCGTCCTTAACT

Flanking Amino Acid:

YHPSSIREMQAAIAKVLHNE

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

73.2

37.5

Major BPS

69.7

0.49

59.9

38.5

Major PPT

0.32

1.1

61.6

44.1

Minor 5ss

36.7

-1.5

2.5

42.7

44.3

Minor BPS

1.05

1.2

84.68

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003063

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003095

3115260 - 3120309

5050