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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3184740_3184919_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3184740 - 3184919

Intron Length:

180

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGAGCAT

U12 Branch Point Sequence:

TGCTCCAGGAGC

Flanking Amino Acid:

YSNQTRHMTQNEQQDVIRQF

Intron Amino Acid Position:

809

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.2

37.4

Major BPS

42.2

-0.4

1.5

45.5

47.5

Major PPT

79.6

0.67

0.8

74.1

31.1

Minor 5ss

23.1

-3.1

3.2

43.5

Minor BPS

44.6

-0.4

56.36

42.1

Associated Gene:

Gene:

DHX58

Ensembl Gene ID:

ENSAPLG00000013187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042817

3182931 - 3187467

4537

ENSAPLT00000039552

3182931 - 3345377

162447

ENSAPLT00000013739

3182176 - 3345377

163202