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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3186388_3186545_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3186388 - 3186545

Intron Length:

158

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTGGGCACG

5'SS Class:

major

3'SS Sequence:

CTCCCCGGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAC

U12 Branch Point Sequence:

CGCTGCTCACCC

Flanking Amino Acid:

REEDTRVELTDFSLLVIDEC

Intron Amino Acid Position:

517

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.35

1.1

53.2

45.5

Major BPS

69.8

0.49

1.1

71.3

36.7

Major PPT

66.7

0.38

60.5

35.2

Minor 5ss

32.4

-2

31.9

42.4

Minor BPS

-0.5

2.2

50.68

46.1

Associated Gene:

Gene:

DHX58

Ensembl Gene ID:

ENSAPLG00000013187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039552

3182931 - 3345377

162447

ENSAPLT00000013739

3182176 - 3345377

163202

ENSAPLT00000042817

3182931 - 3187467

4537