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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3186748_3186851_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3186748 - 3186851

Intron Length:

104

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGCCACA

5'SS Class:

major

3'SS Sequence:

GGGGTGTGTGTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AGCTGAC

U12 Branch Point Sequence:

TTGGAGCTGACG

Flanking Amino Acid:

DGRVAVLVNKVHLVEQHAKE

Intron Amino Acid Position:

450

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

62.5

0.3

1.2

58.5

42.3

Major BPS

57.5

0.19

1.1

48.8

38.1

Major PPT

53.7

0.09

1.1

46.4

45.8

Minor 5ss

38.4

-1.3

3.1

49.3

46.7

Minor BPS

38.4

-1

2.4

47.97

45.5

Associated Gene:

Gene:

DHX58

Ensembl Gene ID:

ENSAPLG00000013187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039552

3182931 - 3345377

162447

ENSAPLT00000013739

3182176 - 3345377

163202

ENSAPLT00000042817

3182931 - 3187467

4537