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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3186874_3341499_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3186874 - 3341499

Intron Length:

154626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

GCCGGGATGGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GAAGCAC

U12 Branch Point Sequence:

TCTGCTGGAAGC

Flanking Amino Acid:

TEGGAAHRDGRVAVLVNKVH

Intron Amino Acid Position:

442

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

76.9

38.6

Major BPS

41.2

-0.5

1.3

43.4

39.2

Major PPT

49.9

-0

1.1

42.3

Minor 5ss

30.9

-2.2

3.6

46.8

48.5

Minor BPS

41.6

-0.6

2.3

54.01

44.5

Associated Gene:

Gene:

DHX58

Ensembl Gene ID:

ENSAPLG00000013187

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039552

3182931 - 3345377

162447

ENSAPLT00000013739

3182176 - 3345377

163202