Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3190988_3191109_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3190988 - 3191109

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACGGCGC

5'SS Class:

major

3'SS Sequence:

CCTCGCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCAGAG

U12 Branch Point Sequence:

GGGGTCAGAGCT

Flanking Amino Acid:

TDPAAMLGPETSLLSANAAR

Intron Amino Acid Position:

585

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

59.1

42.5

Major BPS

43.1

-0.4

1.5

40.4

42.3

Major PPT

68.7

0.42

0.8

61.3

29.1

Minor 5ss

-2.3

3.4

44.8

Minor BPS

39.5

-0.7

1.8

51.1

42.6

Associated Gene:

Gene:

KAT2A

Ensembl Gene ID:

ENSAPLG00000013309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032343

3187578 - 3194164

6587

ENSAPLT00000013875

3188573 - 3196482

7910