Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3191457_3191598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3191457 - 3191598

Intron Length:

142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACCTCGG

5'SS Class:

major

3'SS Sequence:

GTCCCTCCTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCCCAT

U12 Branch Point Sequence:

GGTGTCCCATGG

Flanking Amino Acid:

AEGAQLVSRPAAVSTVAVPT

Intron Amino Acid Position:

503

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.3

54.7

49.5

Major BPS

54.5

0.11

1.4

66.4

42.2

Major PPT

75.2

0.57

0.8

65.7

36.1

Minor 5ss

38.1

-1.3

3.1

50.6

45.7

Minor BPS

32.7

-1.4

33.22

40.2

Associated Gene:

Gene:

KAT2A

Ensembl Gene ID:

ENSAPLG00000013309

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013875

3188573 - 3196482

7910

ENSAPLT00000032343

3187578 - 3194164

6587