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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3193502_3194870_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3193502 - 3194870

Intron Length:
1369

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGCGAGCC

5'SS Class:
major

3'SS Sequence:
TCCATCGTCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTCCAT

U12 Branch Point Sequence:
TGCTGCGTGATG

Flanking Amino Acid:
WRSWGCSRRARPTMPASATA

Intron Amino Acid Position:
222

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.1
0.62
1
63.2
35.6

Major BPS
62.1
0.3
1.4
72.5
43.5

Major PPT
69.7
0.44
0.9
60.7
40.1

Minor 5ss
25.2
-2.9
3.3
33.5
41.9

Minor BPS
43.1
-0.6
2.4
50.43
44.5

Associated Gene:

Gene:
KAT2A

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3188573 - 3196482
7910