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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3205955_3206263_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3205955 - 3206263

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

TGTTTGCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATAAG

U12 Branch Point Sequence:

CCTTCCTGACTG

Flanking Amino Acid:

AIVVYDITNTDTFVRAKNWV

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

74.6

35.3

Major BPS

56.1

0.15

1.6

64.3

39.7

Major PPT

82.6

0.73

0.9

73.5

41.8

Minor 5ss

35.1

-1.7

2.8

49.5

40.3

Minor BPS

49.7

-0.1

1.9

55.5

46.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000027551

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046198

3204525 - 3207606

3082