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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3212663_3213940_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3212663 - 3213940

Intron Length:

1278

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCGGGGACG

5'SS Class:

strong_major

3'SS Sequence:

GTTTGGGGAGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CGTTAAC

U12 Branch Point Sequence:

GCCGCGTTAACG

Flanking Amino Acid:

SICTMLIGGEVLSAGLFSWS

Intron Amino Acid Position:

370

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.72

68.7

36.4

Major BPS

62.1

0.3

1.2

38.7

Major PPT

56.7

0.15

1.2

Minor 5ss

15.4

-4

3.5

21.7

37.6

Minor BPS

47.6

-0.3

2.2

51.24

48.9

Associated Gene:

Gene:

KCNH4

Ensembl Gene ID:

ENSAPLG00000009380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009760

3212609 - 3217108

4500