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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3215792_3216726_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3215792 - 3216726

Intron Length:

935

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTGGGATGG

5'SS Class:

weak_major

3'SS Sequence:

ATGGGGGCTGCAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CAGGAAC

U12 Branch Point Sequence:

CCCGCAGGAACC

Flanking Amino Acid:

PGDKKEGEPWLAGPSPCHRR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.7

0.09

1.1

43.7

40.6

Major BPS

41.9

-0.5

1.3

42.7

36.4

Major PPT

56.8

0.15

1.1

45.4

Minor 5ss

33.4

-1.9

3.4

47.2

48.2

Minor BPS

38.1

-0.9

2.2

43.44

44.2

Associated Gene:

Gene:

KCNH4

Ensembl Gene ID:

ENSAPLG00000009380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009760

3212609 - 3217108

4500