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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3216872_3216978_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3216872 - 3216978

Intron Length:

107

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTGGT

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCCGCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTCCT

U12 Branch Point Sequence:

CTTCCCTCTCCT

Flanking Amino Acid:

QTEVCFYKKGGAAFWCLLDI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.6

0.79

0.9

36.6

Major BPS

32.7

-1

4.2

38.9

Major PPT

65.6

0.35

0.9

57.1

33.4

Minor 5ss

29.1

-2.4

3.2

37.3

42.5

Minor BPS

-0.7

3.6

70.03

46.4

Associated Gene:

Gene:

KCNH4

Ensembl Gene ID:

ENSAPLG00000009380

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009760

3212609 - 3217108

4500