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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3222558_3222779_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3222558 - 3222779

Intron Length:

222

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

TCCCCCGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

CGTCCCCTGACG

Flanking Amino Acid:

SFAWNITVLKGQADLLKHAK

Intron Amino Acid Position:

971

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

64.9

0.34

60.5

35.2

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

-0.1

1.8

58.12

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019832

3219960 - 3228113

8154