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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3222890_3224694_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3222890 - 3224694

Intron Length:

1805

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCCCCGTGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTCCCAC

U12 Branch Point Sequence:

TGTGTCCCACCC

Flanking Amino Acid:

HSKLIQAQQAGMDFHKELHR

Intron Amino Acid Position:

934

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

47.8

-0.1

1.4

58.1

40.4

Major PPT

58.1

0.18

48.5

39.3

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

-0.6

2.1

55.52

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000028081

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019832

3219960 - 3228113

8154