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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3244482_3244776_R


Intron Information:

Intron Rank:
20

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
3244482 - 3244776

Intron Length:
295

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GCG|GTACGTCAC

5'SS Class:
major

3'SS Sequence:
CCTCCTCGTACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTCTGAA

U12 Branch Point Sequence:
TGTGTCTGAAGC

Flanking Amino Acid:
TFTWVEKDISGKTQIQSVEP

Intron Amino Acid Position:
801

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
75.7
0.61
1.1
63.8
42.6

Major BPS
64.4
0.36
1.2
57.3
41.7

Major PPT
73.8
0.54
0.9
67.7
32.4

Minor 5ss
33.9
-1.8
3.1
44.6
43.3

Minor BPS
49.8
-0
1.9
63.34
42.2

Associated Gene:

Gene:
STAT3

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3241615 - 3252705
11091