Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3246891_3247023_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3246891 - 3247023

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGCGCG

5'SS Class:

major

3'SS Sequence:

TTCCTCTTTTGAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCACAC

U12 Branch Point Sequence:

TTTTTTTTTCCT

Flanking Amino Acid:

KDSGDVAALRGSRKFNILGT

Intron Amino Acid Position:

551

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.7

0.65

1.1

60.6

44.5

Major BPS

-0.3

1.1

48.6

36.6

Major PPT

67.4

0.39

1.7

80.3

31.7

Minor 5ss

36.2

-1.6

3.3

39.7

45.8

Minor BPS

45.5

-0.2

3.6

82.93

38.6

Associated Gene:

Gene:

STAT3

Ensembl Gene ID:

ENSAPLG00000007739

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008159

3241615 - 3252705

11091