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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3251144_3252211_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
3251144 - 3252211

Intron Length:
1068

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAGGAGAG

5'SS Class:
strong_major

3'SS Sequence:
CTGCCCCCCCCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAC

U12 Branch Point Sequence:
GCTGACTGACCC

Flanking Amino Acid:
PTPFLFPPARRSPEPARMAQ

Intron Amino Acid Position:
165

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80
0.71
1
66
40.1

Major BPS
66.3
0.4
1.1
57
41.8

Major PPT
67.8
0.4
0.8
58.1
33.1

Minor 5ss
28.4
-2.5
3.5
37
47.6

Minor BPS
44.1
-0.4
2
52.78
44.3

Associated Gene:

Gene:
STAT3

Ensembl Gene ID:

Chromosome:
28

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

3241615 - 3252705
11091