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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3282904_3283092_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3282904 - 3283092

Intron Length:

189

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTATGCCTC

5'SS Class:

major

3'SS Sequence:

TTTCTCTGTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCAAAT

U12 Branch Point Sequence:

CTGCTCCGACCA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.6

0.51

1.1

60.1

44.7

Major BPS

55.9

0.15

61.2

32.6

Major PPT

79.5

0.66

0.8

73.6

Minor 5ss

-0.1

2.8

68.9

Minor BPS

40.9

-0.6

1.9

49.74

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021375

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045785

3271527 - 3283797

12271

ENSAPLT00000033686

3277373 - 3283797

6425