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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3292368_3295897_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3292368 - 3295897

Intron Length:

3530

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCTTGAATT

5'SS Class:

weak_major

3'SS Sequence:

TGTAGGTGCAGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGTGTAT

U12 Branch Point Sequence:

TATTCTTGTAGG

Flanking Amino Acid:

VFVLIVYWKGSRLYCPLCR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.19

1.4

65.2

Major BPS

56.3

0.16

1.5

57.4

49.1

Major PPT

45.4

-0.2

1.7

45.1

45.7

Minor 5ss

31.1

-2.2

3.9

42.3

44.3

Minor BPS

46.4

-0.4

2.1

57.01

44.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007104

3292339 - 3303318

10980