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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3296107_3297471_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3296107 - 3297471

Intron Length:

1365

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCT|GTATAGATC

5'SS Class:

weak_major

3'SS Sequence:

AGTTACTTGAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATGCAA

U12 Branch Point Sequence:

GTTACTTGAAAG

Flanking Amino Acid:

GKSQIHERICFLQLGISLCT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.4

0.08

1.1

56.2

40.8

Major BPS

0.2

1.3

69.6

37.5

Major PPT

0.13

1.2

56.4

Minor 5ss

45.2

-0.5

3.2

69.4

41.6

Minor BPS

-0

1.7

59.51

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007104

3292339 - 3303318

10980