Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_28_3299766_3300414_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3299766 - 3300414

Intron Length:

649

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACT|GTGAGTATC

5'SS Class:

major

3'SS Sequence:

TTTTTAAAAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ATTTTTTTAAAA

Flanking Amino Acid:

SIQFALRRGTEHSGSTVPSI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.54

1.1

74.7

35.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

72.2

0.5

68.4

40.3

Minor 5ss

37.8

-1.4

55.7

41.6

Minor BPS

72.4

0.7

1.2

78.49

31.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043514

3298175 - 3303453

5279