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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3300566_3300770_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3300566 - 3300770

Intron Length:

205

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATCCA

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTCCTACAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTCAT

U12 Branch Point Sequence:

TTTTCTCCTACA

Flanking Amino Acid:

GIGTYREINPAPYTIITFPF

Intron Amino Acid Position:

200

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.9

0.82

0.9

36.5

Major BPS

0.65

1.1

77.4

37.3

Major PPT

0.9

0.6

84.8

23.1

Minor 5ss

33.9

-1.8

2.9

42.4

44.3

Minor BPS

49.1

-0

2.1

72.55

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043514

3298175 - 3303453

5279

ENSAPLT00000007104

3292339 - 3303318

10980