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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3300911_3301671_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3300911 - 3301671

Intron Length:

761

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGAGA

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTATGTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTTTTTATGT

Flanking Amino Acid:

RILSQKSDNEMFNTVFSGRY

Intron Amino Acid Position:

247

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

39.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

84.5

0.78

0.9

85.7

33.4

Minor 5ss

-2.2

3.2

45.7

Minor BPS

61.2

0.43

1.9

82.72

39.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043514

3298175 - 3303453

5279

ENSAPLT00000007104

3292339 - 3303318

10980