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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3302375_3303195_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3302375 - 3303195

Intron Length:

821

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCA|GTAAGAGCC

5'SS Class:

major

3'SS Sequence:

TGTTTTTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAT

U12 Branch Point Sequence:

TGTTTTTTCACA

Flanking Amino Acid:

GGPYPFGIDPIWNIATNKLA

Intron Amino Acid Position:

330

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.7

0.49

1.1

36.5

Major BPS

78.2

0.7

77.9

32.1

Major PPT

87.8

0.85

0.7

83.5

31.6

Minor 5ss

33.9

-1.8

3.4

48.8

Minor BPS

63.6

0.42

1.7

75.16

36.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043514

3298175 - 3303453

5279

ENSAPLT00000007104

3292339 - 3303318

10980