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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3303315_3303407_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3303315 - 3303407

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

AGGAGTCTATCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

ATCTGTTTAAGA

Flanking Amino Acid:

FGVTLSLLNHILXXXXXXXX

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

80.9

31.3

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

56.7

0.15

1.1

52.2

46.3

Minor 5ss

37.8

-1.4

3.3

55.2

42.1

Minor BPS

51.6

0.05

64.77

42.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000006725

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043514

3298175 - 3303453

5279