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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3340147_3340387_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3340147 - 3340387

Intron Length:

241

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGTCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAC

U12 Branch Point Sequence:

GTGCCCTGACCC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

56.5

0.16

1.1

48.6

36.6

Major PPT

75.1

0.57

0.9

66.2

40.8

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

50.1

-0

1.8

61.79

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017262

3338413 - 3345377

6965