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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3340442_3340549_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3340442 - 3340549

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAAGAGG

5'SS Class:

major

3'SS Sequence:

GCTCCTCTCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATGAA

U12 Branch Point Sequence:

GCCCCATGAACG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

62.8

43.2

Major BPS

50.5

0.01

1.1

43.3

37.8

Major PPT

74.9

0.56

0.8

68.6

31.7

Minor 5ss

25.6

-2.8

30.6

42.9

Minor BPS

46.4

-0.4

1.8

47.98

44.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017262

3338413 - 3345377

6965