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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3340971_3341261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3340971 - 3341261

Intron Length:

291

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGGCCC

5'SS Class:

major

3'SS Sequence:

GCTGTCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAT

U12 Branch Point Sequence:

CCATCCCCAGCT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.43

1.1

55.8

40.2

Major BPS

48.9

-0

1.3

39.1

Major PPT

69.3

0.43

0.9

34.8

Minor 5ss

31.1

-2.2

3.5

43.2

44.1

Minor BPS

-0.3

2.1

61.94

47.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017262

3338413 - 3345377

6965