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Intron Name: Anas_platyrhynchos_platyrhynchos_28_3341367_3341499_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

3341367 - 3341499

Intron Length:

133

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGGGT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCATGAC

U12 Branch Point Sequence:

AGCGCCATGACC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.4

0.93

0.9

76.9

38.6

Major BPS

49.9

-0

1.2

37.8

Major PPT

72.8

0.51

0.8

64.2

36.7

Minor 5ss

30.9

-2.2

3.6

46.8

48.5

Minor BPS

49.1

-0

1.8

57.79

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026477

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017262

3338413 - 3345377

6965